AMBER-9 Tutorial
"Standard" Simulatio
n
- (as
1cgh-standard.zip
file, 3,750 Kb)
Calculation using non-standard residue(s)
- (as
1cgh-nonstandard.zip
file, 50,055 Kb)
Estimation of protein-ligand binding energy in non-covalent complex
- (as
1cgh-ligand.zip
file, 47,719 Kb)
Analysis of MD results
- (as
analysis.zip
file, 22,016 Kb)
QM/MM Calculations
- (as
1cgh-qm-mm.zip
file, 637 Kb)
Related PPT files:
Amber Setup
Amber Standard Setup
Amber Nonstandard Setup
MM-PBSA in Amber9
Amber9 Simple Analysis
Amber9: QM/MM
